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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810861.1_cds_XP_016496416.1_10640
CDS Infomation

[gene=LOC107815359] [db_xref=GeneID:107815359] [protein=proline-rich receptor-like protein kinase PERK15] [protein_id=XP_016496416.1] [location=complement(join(170167..170466,170917..171078,172299..172446,172610..172686,173856..173926,174034..174141,175042..175578,176836..177193))] [gbkey=CDS]
Sequence

ATGTCTTTTGGGCCTCCGGGAGTGGCGTCGGGCCCAACGTTGCCGTTTTTGCCGTCGGAT
AATGCAACTGCTCCACCACCTCCGGTGGACCCCAGTATAACTCCTCCGGCTACAGGCGTT
GCTAGTCCGCCATCTCCGGCGACCTTGATAATTCCGCCGCCTACATCGGGCAATGGAACC
TCTAGAACGGGTGCTCCGTCGTCAAACAGTACTACTTTAGTGGCACTAGGAGTGGGAATT
GGGATTGGGGGAGCACTTGTGCTTATTTGCGTGGGCATTTTTGCCCTTTGGTATAAGAGG
AGAAAAAAGCGTCTTGGATTGGATGGTTTTGGTCACGCTCCTTCACAAGGTCCCAAAGAT
AATTGTTTTGGAGGTCAACATCATCAATGGCAACAAAATGCTCCTCCATCAGCAGAAAGC
ATGGTGAGGATACCACTAAATCCCTCTCCTCCACCAGCTGTTACATCAGGTTCACAAGTA
TCGTCAGTAGATGGATCTACTCCTCCACTGCCACCTTCCACTGGCAGTAACTTGAGTTCT
AACAAACATTTTCTACAACCAACTTCTGATTCCAACTTGAGTGTCTCCAGAACTACATTT
ACCTATCAAGAATTAGCAACTGCTACCGCAAATTTCTCTGTTACCAACCTCCTTGGTCAG
GGTGGTTTTGGATATGTATACAAGGGAGTATTCCATGATGGGAAGGAGGTTGCAATTAAG
CAACTAAAAGTTGGAAGTGGGCAGGGAGAGCGTGAATTTCAAGCAGAGGTGGAGATTATT
AGTCGTGTTCATCACAAGCATCTTGTTTCATTGGTTGGACACTGCATTTCAGGGGTCCAG
AGGTTGTTAGTTTATGAGTTTGTCCCAAACAAAACCTTGGAGTTCCACTTGCATGAAAAA
GGAGACATAACAGCAGGCAAGGAGCATTCTCCACTAAGCTGGGAAACTAGGATGAGAATT
GCTTTAGGCTCTGCAAGAGGATTGGCGTATCTTCACGAAGACTGTCATCCCAAGATCATA
CATCGCGATATCAAGGCCTCCAATATTCTTATTGATGACAATTTTGATGCAAAGGTGGCT
GATTTTGGGCTTGCGAGGTTGAATTATGACACTGATACTCACGTCTCCACACGAGTAATG
GGAACTTTTGGGTACTTAGCTCCTGAGTATGCTCTTACTGGGAAATTGACTGACAAGTCT
GATGTCTTCTCTTTTGGAGTCATGCTTTTGGAGATTATAACTGGACGACGGCCAATTGAT
AAAGCTCAACACTACCTTGATGATAATATTGTTGACTGGGCGAGGCCTTTGCTTACCCAG
GCCCTGGATGATGACAACTTTGATACTCTTGCCGATCCAAGGTTGGAGAAGAATTATGAC
TCTACTGAGATGACCCGCATGGTTACTTGTGCTGCTGTTTGTGTGCGCCATCTGGCACGT
CGCAGGCCTCGTATGAGTCAGATTGTCAGAGCTTTAGAAGGAAATTTGCCGTTGGATGAT
TTAAATGAGGGACTTAGACCTGGACATAGTGGTATATATGAATCTTATGGGAGCTCGGAT
TTCGACTCTGCTCAGTACAAGGAAGACCTTAAGAAATTTAGAAAGATGGCACTAGAAAGC
CAGGCGCAGAACTCGAGTGAATGCAGTGGACCTACCAGCGAATTCGGCCCACATCCCTCT
GGTTCAAGTAGTGAAGGCCTAAGAACAACTCAAGATACACGCCCTAGTATTGATGGTCGA
CGAGATATTAGAATAGAGTAG

Peptide Sequence

PEP ID

XP_016496416.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK15 [Nicotiana tabacum]
Sequence

MSFGPPGVASGPTLPFLPSDNATAPPPPVDPSITPPATGVASPPSPATLIIPPPTSGNGT
SRTGAPSSNSTTLVALGVGIGIGGALVLICVGIFALWYKRRKKRLGLDGFGHAPSQGPKD
NCFGGQHHQWQQNAPPSAESMVRIPLNPSPPPAVTSGSQVSSVDGSTPPLPPSTGSNLSS
NKHFLQPTSDSNLSVSRTTFTYQELATATANFSVTNLLGQGGFGYVYKGVFHDGKEVAIK
QLKVGSGQGEREFQAEVEIISRVHHKHLVSLVGHCISGVQRLLVYEFVPNKTLEFHLHEK
GDITAGKEHSPLSWETRMRIALGSARGLAYLHEDCHPKIIHRDIKASNILIDDNFDAKVA
DFGLARLNYDTDTHVSTRVMGTFGYLAPEYALTGKLTDKSDVFSFGVMLLEIITGRRPID
KAQHYLDDNIVDWARPLLTQALDDDNFDTLADPRLEKNYDSTEMTRMVTCAAVCVRHLAR
RRPRMSQIVRALEGNLPLDDLNEGLRPGHSGIYESYGSSDFDSAQYKEDLKKFRKMALES
QAQNSSECSGPTSEFGPHPSGSSSEGLRTTQDTRPSIDGRRDIRIE

Transcript Sequence

Gene sequence data has not been registered.